Algoritmi per l'analisi di dati da Single cell e tematiche relative (2021/2022)

Course code
cod wi: DT000241
Name of lecturer
Rosalba Giugno
Coordinator
Rosalba Giugno
Number of ECTS credits allocated
3
Academic sector
INF/01 - INFORMATICS
Language of instruction
Italian
Location
VERONA
Period
A.A. 21/22 dottorato dal Oct 1, 2021 al Sep 30, 2022.

Lesson timetable

Go to lesson schedule

Learning outcomes

Students will learn cutting-edge topics in the field of Single cell Analysis and related topics. They will have the opportunity to discuss and interact with some of the leading Italian and international researchers in the sector.

Syllabus

The course will be organized in 6 meetings, via zoom (https://univr.zoom.us/j/9174698091). An expert from the research area will be invited to each meeting. Below are the dates of the first 4 meetings and the issues addressed. PhD students interested in participating must send an email to rosalba.giugno@univr.it by 13 January 2022.

18 January 16.00-18: 00, Speaker: Gary Bader, Developing a cellular ecosystem model of human tissue organization

20 January 9: 00-11: 00, Speaker: Davide Risso, Large-scale statistical analysis of single-cell RNA-seq data: normalization, dimensionality reduction, and clustering

25 January 16:00 -18: 00, Speaker: Giuseppe Narcisi, Somatic variant analysis of linked-reads sequencing data with Lancet

January 26 11:00 -13: 00, Speaker: Levi Waldron, Single Cell Multimodal Data Technologies

Reference books

Vedi la bibliografia dell'insegnamento

Assessment methods and criteria

The doctoral students who will participate in all the meetings to have recognized the course will have to present a seminar with a practical demonstration of the use of an algorithm / software to be agreed with the teacher. PhD students will have two months to prepare for the seminar.