Molecular Biology (2016/2017)

Course code
4S004476
Name of lecturer
Stefano Capaldi
Coordinator
Stefano Capaldi
Number of ECTS credits allocated
6
Academic sector
BIO/11 - MOLECULAR BIOLOGY
Language of instruction
Italian
Location
VERONA
Period
I sem. dal Oct 3, 2016 al Jan 31, 2017.

Lesson timetable

I sem.
Day Time Type Place Note
Monday 2:30 PM - 4:30 PM lesson Lecture Hall D  
Wednesday 2:30 PM - 4:30 PM lesson Lecture Hall D  

Learning outcomes

The aim of this course is to provide a detailed description at the molecular level of the main issues regarding the mechanisms involved transmission, variation and expression of the information contained in the genome of prokaryotes and eukaryotes. The main themes of the course will be a detailed description of the processes of gene transcription and translation and those related to DNA replication and mutagenesis.
At the end of the course, the student will have understood in detail the processes and mechanisms that regulate the flow of genetic information in the cell and use this knowledge in various aspects of Bioinformatics.

Syllabus

Program of the course:
The genetic information and informational molecules
General introduction and history. The structure of DNA and RNA. From genes to proteins, messenger RNA, transfer RNA and ribosomal RNA. The genetic code.
DNA and gene structure
The definition of gene. Coding and regulatory regions. Genes interrupted; introns.
Organization and evolution of genomes
DNA content and number of genes. Repetitive DNA. Gene families and gene duplication. Mutation, rearrangements of DNA and evolution of genomes.
The genomes of organelles.
Mobile genetic elements
Transposons,retrotransposons and retrovirus.
Chromatin and chromosomes
The nucleosomes; histones and their modifications. Higher levels of organization of chromatin. Eterochromatin and euchromatin. Eukaryotic chromosomes,telomers and centromeres.
DNA replication
The DNA polymerase. Proofreading activities of DNA polymerase.
The mechanism of replication in bacteria and eukaryotes.
Mutations and DNA repair
Spontaneous mutations and mutations caused by physical and chemical mutagens. Pre and post replication rapair systems. Recombination in immune system cells.
RNAs and transcription
The different types of RNA: synthesis and maturation. Bacterial RNA polymerase. The sigma factors. The eukaryotic RNA polymerase. Eukaryotic mRNA : capping, polyadenilation, transport in the cytoplasm. The process of transcription in bacteria and eukaryotes.
Regulation of gene expression
Bacterial promoters. Operons. Eukaryotic promoters. The regulation elements: enhancers, silencers, insulators, LCR. Gene expression and chromatin modifications. Epigenetic effects.
Introns and RNA Splicing
Spliceosomal introns. The spliceosome and mechanism of splicing. Alternative splicing and trans-Splicing. Other types of introns: group I and II introns. RNA editing. Ribozymes and riboswitch.
Translations
The ribosomes. Structure and function of tRNA. Synthesis of aminoacil-tRNA. Beginning of translation in bacteria and eukaryotes. Synthesis of polypeptides and termination of translation. Regulation of the translation. Location of proteins.

The teaching material used in class lessons is available on the e-learning platform of the course.

Suggested textbooks:
Lewin, The Gene - Compact Edition, Zanichelli
Cox, Molecular Biology, Zanichelli
Watson, Molecular Biology of the Genus, Zancihelli

Reference books
Author Title Publisher Year ISBN Note
Michael Cox Biologia Molecolare Zanichelli 2013
WATSON James D , BAKER Tania A , BELL Stephen P , GANN Alexander , LEVINE Michael , LOSICK Richard Biologia molecolare del gene (Edizione 7) Zanichelli 2015 978-88-08-36480-7
LEWIN Benjamin IL GENE Edizione compatta Zanichelli 2006 978-8808-06877-4

Assessment methods and criteria

The exam consists of multiple-choice test.

STUDENT MODULE EVALUATION - 2016/2017